Phenol Chloroform DNA Extraction Kit

What is Phenol-Chloroform DNA Extraction Kit?

The phenol-chloroform DNA extraction kit is a classic DNA extraction kit that utilizes the chemical properties of phenol and chloroform to separate DNA from proteins, lipids, and other cellular debris.

This kit uses detergent and proteinase K to thoroughly lyse cells, releasing nucleic acids and denaturing proteins. Extraction begins with a carefully proportioned mixture of phenol, chloroform, and isoamyl alcohol. Once separated and layered, the tubes are transferred to a tube and pre-chilled ethanol or isopropanol is added to precipitate the DNA. The DNA is then washed with ethanol to remove salts, air-dried, and re-dissolved in a buffer solution.

Preparing a phenol-chloroform solution in-house offers low extraction costs per extraction and minimizes shear stress on high-molecular-weight DNA, making it suitable for extracting very long genomic DNA fragments from precious samples. It also minimizes residual inhibitors, making it a gold standard method for applications requiring high purity, such as transgenic animal identification, embryo manipulation, and long-range PCR.

Phenol Chloroform DNA Extraction Kit

Technical Specifications

Model Method Sample Format Workflow
PC-UNI-20R Phenol-Chloroform Universal 20R Manual
PC-UNI-50R Phenol-Chloroform Universal 50R Manual
PC-UNI-100R Phenol-Chloroform Universal 100R Manual
PC-UNI-200R Phenol-Chloroform Universal 200R Manual
PC-UNI-8R Phenol-Chloroform Universal 8R Semi-automated or Fully Automated
PC-UNI-24R Phenol-Chloroform Universal 24R Semi-automated or Fully Automated
PC-UNI-48R Phenol-Chloroform Universal 48R Semi-automated or Fully Automated
PC-UNI-72R Phenol-Chloroform Universal 72R Semi-automated or Fully Automated
PC-UNI-96R Phenol-Chloroform Universal 96R Semi-automated or Fully Automated

Working Principle

The principle behind the Phenol-Chloroform DNA Extraction Kit revolves on liquid-liquid extraction, where phenol and chloroform are used to denature and separate biomolecules based on their solubility. Initially, the sample is lysed to release DNA, followed by the addition of phenol, which denatures proteins and causes them to precipitate. Chloroform is then introduced to enhance the separation by forming a distinct organic phase that traps proteins and lipids, while the DNA remains in the aqueous phase. This phase separation allows for the easy retrieval of pure DNA through careful pipetting or centrifugation.

This method exploits the hydrophobic and hydrophilic properties of the components, ensuring that DNA is isolated with high purity. The process may include additional steps, such as ethanol precipitation, to concentrate and wash the DNA, removing any residual solvents. Understanding this principle is key to mastering the technique, as it highlights the chemical interactions that make phenol-chloroform extraction so effective for obtaining uncontaminated genetic material suitable for advanced molecular applications.

Performance

The performance of the Phenol-Chloroform DNA Extraction Kit is characterized by its high efficiency in purifying DNA with excellent integrity and yield. It consistently removes inhibitors such as proteins and polysaccharides, which can interfere with molecular techniques, resulting in DNA that is ideal for amplification and analysis. This method is known for its ability to handle a wide range of sample inputs, from small volumes to larger quantities, without compromising on purity. Users can expect consistent results across multiple experiments, reducing the need for repeat extractions and saving valuable time in the lab.

In comparative studies, phenol-chloroform extraction often demonstrates superior performance in terms of DNA quality when dealing with difficult samples, such as those with high lipid content or environmental contaminants. The kit's reliability makes it a preferred option in fields like forensics and clinical research, where accurate DNA analysis is critical. However, it requires careful handling due to the toxic nature of the chemicals involved, emphasizing the importance of following safety protocols to ensure both user safety and optimal performance.

Application

The Phenol-Chloroform DNA Extraction Kit finds extensive applications across various scientific disciplines, including molecular biology, genetics, and forensic science. It is commonly used in research laboratories for extracting DNA from diverse sample types such as blood, tissue, cells, and environmental samples. In clinical settings, it supports genetic testing, mutation analysis, and the study of infectious diseases by providing high-quality DNA for diagnostic purposes. Its versatility allows it to be employed in both human and animal studies, as well as in agricultural and food safety testing.

Additionally, this kit is invaluable in forensic investigations, where it helps isolate DNA from challenging evidence like hair, bones, or degraded samples, aiding in identification and legal proceedings. In environmental science, it enables the extraction of DNA from soil, water, or microbial cultures for biodiversity assessments and pollution monitoring. The broad applicability of the phenol-chloroform method ensures that it remains a cornerstone tool in any lab focused on DNA-based analyses, catering to both routine and specialized needs.

Core Features and Advantages

The core features of the Phenol-Chloroform DNA Extraction Kit include its high efficiency in removing contaminants, leading to DNA of exceptional purity and yield. One significant advantage is its adaptability to a wide range of sample types, from simple blood samples to complex forensic or environmental specimens. The kit is designed for reliability, often outperforming other methods in terms of DNA integrity, which is crucial for sensitive downstream processes like next-generation sequencing. Additionally, it is cost-effective for high-throughput labs, as the reagents are relatively inexpensive and can be scaled for large batches.

Another key advantage is the kit's ability to handle samples with high levels of inhibitors, such as those found in plant tissues or polluted environments, making it a versatile choice for diverse research needs. However, users must be aware of the safety considerations due to the toxic nature of phenol and chloroform, which require proper ventilation and protective equipment. Despite this, the benefits of high-quality DNA extraction make it a valuable tool in any molecular biology toolkit, offering proven results that support accurate scientific discoveries.

Method
Phenol Chloroform
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